Deutsch Intern
    Chair of Computer Science VI - Artificial Intelligence and Applied Computer Science

    Jonatha Krebs, M.Sc.

    University of Würzburg
    Chair of Artificial Intelligence
    and Knowledge Systems
    Am Hubland
    D-97074 Würzburg

    Room: B007
    Phone: +49 931 / 31 - 89648
    Fax: +49 931 / 31 - 86732

    jonathan.krebs@uni-wuerzburg.de

     

     

    About Me

    I am working at the Department for Artificial Intelligence and Applied Computer Science since the beginning of 2015. While working at the PaDaWaN/misbased project, I finished my master's degree in computer science in autumn 2016.

    Research Interests

    My research interests include:

    • machine learning
    • textmining
    • natural language processing
    • ontology learning
    • knowledge-based systems
    • software development

    ... especially in the domain of medical text documents, but also in every other possible domain.

     

    Private Interests

    In my spare time I am playing keyboards and drums in several bands and orchestras and I am very interested in music from all epochs and styles in general. Further interests include books, films and tv shows, fotography, dancing, pc and board games, ...

     

    Teaching

    WS 18/19 Natural Language Processing and Textmining (Coordinator for exercises)
    SS 18 Medical Informatics(Coordinator for exercises)
    WS 17/18 Natural Language Processing and Textmining (Coordinator for exercises)
    SS 17 Software engineering (Coordinator for exercises)
    regularly Supervision of seminar papers, groups in the software practical course and final theses.

    Publications

    2019[ to top ]
    • Exploration of Artificial Intelligence Use with ARIES in Multiple Myeloma Research. Loda; Krebs; Danhof; Schreder; Solimando; Strifler; Rasche; Kortüm; Kerscher; Knop; et al. In Journal of Clinical Medicine, 8(7), S. 999. MDPI AG, 2019.
    • Detection of Scenes in Fiction. Gius, Evelyn; Jannidis, Fotis; Krug, Markus; Zehe, Albin; Hotho, Andreas; Puppe, Frank; Krebs, Jonathan; Reiter, Nils; Wiedmer, Nathalie; Konle, Leonard. In Proceedings of Digital Humanities 2019. 2019.
    • Replicating medication trend studies using ad hoc information extraction in a clinical data warehouse. Dietrich, Georg; Krebs, Jonathan; Liman, Leon; Fette, Georg; Ertl, Maximilian; Kaspar, Mathias; Störk, Stefan; Puppe, Frank. In BMC Med. Inf. & Decision Making, 19(1), S. 15:1–15:21. 2019.
    • Query Translation between AQL and CQL. Fette, Georg; Kaspar, Mathias; Leon, Liman; Ertl, Maximilian; Krebs, Jonathan; Dietrich, Georg; Störk, Stefan; Puppe, Frank. 2019.
    • Identifying Heart Failure Patients by Medical Text Classification. Krebs, Jonathan; Krug, Markus; Fette, Georg; Dietrich, Georg; Ertl, Maximilian; Güder, Gülmisal; Puppe, Frank; Kaspar, Mathias. In EFMI-STC, Bd. 258 von Studies in Health Technology and Informatics, A. S. Shvo, I. Madsen, H.-U. Prokosch, K. Häyrinen, K.-H. Wolf, F. Martín-Sánchez, M. Löbe, T. M. Deserno (Hrsg.), S. 251–252. IOS Press, 2019.
    • Implementation of a HL7 CQL engine using the graph database Neo4J. Fette, Georg; Kaspar, Mathias; Liman, Leon; Eertl, Maximilian; Krebs, Jonathan; Störk, Stefan; Puppe, Frank. 2019.
    2018[ to top ]
    • Estimating a Bias in ICD Encodings for Billing Purposes. Fette, Georg; Krug, Markus; Kaspar, Mathias; Liman, Leon; Dietrich, Georg; Ertl, Maximilian; Krebs, Jonathan; Störk, Stefan; Puppe, Frank. In MIE, Bd. 247 von Studies in Health Technology and Informatics, A. Ugon, D. Karlsson, G. O. Klein, A. Moen (Hrsg.), S. 141–145. IOS Press, 2018.
    • Exporting Data from a Clinical Data Warehouse. Fette, Georg; Kaspar, Mathias; Liman, Leon; Dietrich, Georg; Ertl, Maximilian; Krebs, Jonathan; Störk, Stefan; Puppe, Frank. In eHealth, Bd. 248 von Studies in Health Technology and Informatics, G. Schreier, D. Hayn (Hrsg.), S. 88–93. IOS Press, 2018.
    • Finding Needles in the Haystack: Identifying Patients with Rare Subtype of Multiple Myeloma Supported by a Data Warehouse and Information Extraction. Krebs, Jonathan; Bittrich, Max; Dietrich, Georg; Ertl, Maximilian; Fette, Georg; Kaspar, Mathias; Liman, Leon; Einsele, Hermann; Puppe, Frank; Knop, Stefan. In GMDS, Bd. 253 von Studies in Health Technology and Informatics, U. Hübner, U. Sax, H.-U. Prokosch, B. Breil, H. Binder, A. Zapf, B. Strahwald, T. Beißbarth, N. Grabe, A. Schöler (Hrsg.), S. 160–164. IOS Press, 2018.
    • Ad Hoc Information Extraction for Clinical Data Warehouses. Dietrich, Georg; Krebs, Jonathan; Fette, Georg; Ertl, Maximilian; Kaspar, Mathias; Störk, Stefan; Puppe, Frank. In Methods of Information in Medicine. 2018.
    2017[ to top ]
    • A Customizable Importer for the Clinical Data Warehouses PaDaWaN and I2B2. Fette, Georg; Kaspar, Mathias; Dietrich, Georg; Ertl, Maximilian; Krebs, Jonathan; Störk, Stefan; Puppe, Frank. In GMDS, Bd. 243 von Studies in Health Technology and Informatics, R. Röhrig, A. Timmer, H. Binder, U. Sax (Hrsg.), S. 90–94. IOS Press, 2017.
    • Semi-Automatic Terminology Generation for Information Extraction from German Chest X-Ray Reports. Krebs, Jonathan; Corovic, Hamo; Dietrich, Georg; Ertl, Max; Fette, Georg; Kaspar, Mathias; Krug, Markus; Störk, Stefan; Puppe, Frank. In GMDS, Bd. 243 von Studies in Health Technology and Informatics, R. Röhrig, A. Timmer, H. Binder, U. Sax (Hrsg.), S. 80–84. IOS Press, 2017.
    • Extending the Query Language of a Data Warehouse for Patient Recruitment. Dietrich, Georg; Ertl, Maximilian; Fette, Georg; Kaspar, Mathias; Krebs, Jonathan; Mackenrodt, Daniel; Störk, Stefan; Puppe, Frank. In GMDS, Bd. 243 von Studies in Health Technology and Informatics, R. Röhrig, A. Timmer, H. Binder, U. Sax (Hrsg.), S. 152–156. IOS Press, 2017.
    2016[ to top ]
    • Anonymisierung, Segmentierung und Terminologie-Entwicklung zur Informationsextraktion aus unstrukturierten, telegrammartigen, medizinischen Dokumenten. Krebs, Jonathan. 2016.
    • An improved data workflow for a medical data warehouse. Fette, Georg; Ertl, Maximilian; Dietrich, Georg; Krebs, Jonathan; Toepfer, Martin; Störk, Stefan; Kaspar, Mathias; Puppe, Frank. In European Journal of Epidemiology; Health—exploring complexity: an interdisciplinary systems approach HEC2016, 31, Supplement 1, S. 54. 2016.
    • Web-PaDaWaN: Eine Web-basierte Benutzeroberfläche für ein klinisches Data Warehouse. Dietrich, Georg; Fell, Friedreich; Fette, Georg; Krebs, Jonathan; Ertl, Maximilian; Kaspar, Mathias; Störk, Stefan. 2016.
    2013[ to top ]
    • Implementierung einer HTML5-Applikation mit Offline-Fähigkeit zur Erstellung von Graphen für den Einsatz im CaseTrain-Projekt. Krebs, Jonathan. 2013.